Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
STAD rs7539642 chr1:197063841 A/G 1.62E-7 406 4.02 17.43 14.07 KM Plot
STAD rs7542397 chr1:197096720 G/A 1.2E-7 406 4.02 17.05 14.07 KM Plot
STAD rs7542505 chr1:227446937 T/A 0 404 14.25 14.45 1.48 KM Plot
STAD rs7542557 chr1:182688845 T/A 5.94E-6 401 14.07 17.3 4.75 KM Plot
STAD rs7544923 chr1:227389925 C/T 0 405 14.27 14.45 1.48 KM Plot
STAD rs7548758 chr1:40722675 C/G 6.51E-9 393 14.93 12.6 3.13 KM Plot
STAD rs7550123 chr1:40719005 A/G 6.51E-9 393 14.93 12.6 3.13 KM Plot
STAD rs75558005 chr1:227412734 T/C 0 404 14.27 14.23 1.48 KM Plot
STAD rs75565591 chr7:20642173 T/C 1.11E-16 397 14.07 15.87 0.8 KM Plot
STAD rs7608723 chr2:46367592 C/T 1.14E-7 402 2.03 15.65 14.27 KM Plot
STAD rs7612428 chr3:118480691 G/T 1.13E-5 405 14.13 17.92 2.7 KM Plot
STAD rs76141989 chr1:227325274 A/G 0 405 14.42 14.07 1.48 KM Plot
STAD rs7616383 chr3:118492501 C/A 1.16E-5 404 14.07 18.4 2.7 KM Plot
STAD rs76350012 chr1:227440555 A/G 0 404 14.27 14.23 1.48 KM Plot
STAD rs7655803 chr4:53664110 G/A 2.82E-6 398 14.07 18.53 6.17 KM Plot